Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904337.1_cds_XP_016454479.1_48503
CDS Infomation

[gene=LOC107778704] [db_xref=GeneID:107778704] [protein=DEAD-box ATP-dependent RNA helicase 35-like] [exception=annotated by transcript or proteomic data] [protein_id=XP_016454479.1] [location=join(53669..53671,55002..55903,56422..>56453)] [gbkey=CDS]
Sequence

ATGGAGATGGAGGAGGAAGATGATTATGTTGAGTATATACCAGTTGCAAAGCGCAGGGTA
ATTGAGGCGCAAAAGATACTTCAACGCAAGGGGAAATCTGAAGCATTTGAAGAGGAAGAG
GAGAAAATAAAGCTGGTCGAGGCTAAGCCTAGTTTGCTTGTGAAGGCATCTCAGCTCAAG
AAAGAGCAACCTGAGATAAGTCATGCCGAACAAGTGTTTCAACAAGAGAAGGAGATGATT
GAGCATTTATCTGATAAGAAGACGCTGATGTCCGTTAGGGAACTAGCCAAAGGCATTACT
TATACGGAGCCTTTGCGCACAGGGTGGAAGCCACCATTAGCCATTAGGCGGAATTCAAAG
AAAGCTTGTGATGCCATTCGTAAACAGTGGCATATCATCGTAGAGGGGGATGATGTTACC
CCACCAATCAAGAACTTCAAGGACATGCGGTTCCCTGAACCAATTCTGAAGAAACTCAGA
GCAAAGGGGATCGTTCAGCCAACCCCGATTCAAGTACAGGGGCTTCCAGTCATTTTATCA
GGCCGGGATATGATAGGCATAGCTTTCACAGGATCGGGTAAGACATTAGTTTTTGTGTTG
CCACTTATCATGGTTGCGTTGCAAGAAGAAATTATGATGCCAATTGCCCCTGGGGAAGGA
CCTTTTGGCTTGATTATTTGTCCATCTAGAGAGCTTGCTAGACAGACATATGAAGTTATA
GAAGAGTTTATAGAACCTCTGAGGGAGAGTGGTTATCCTGACTTGAGGCCTTTGCTATGT
ATTGGTGGAGTTGATATGAAGTCTCAAGTTGACGTTGTGAAGAGGGGAGTTCATATAGTT
GTTGCTACACCTGGAAGACTGAAAGATCTGCTAGCGAAAAAGAAAATGAACCTTGACAAT
TGCAGATACTTGACGCTAGATGAGGCAGACAGATTAG

Peptide Sequence

PEP ID

XP_016454479.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Nicotiana tabacum]
Sequence

MEMEEEDDYVEYIPVAKRRVIEAQKILQRKGKSEAFEEEEEKIKLVEAKPSLLVKASQLK
KEQPEISHAEQVFQQEKEMIEHLSDKKTLMSVRELAKGITYTEPLRTGWKPPLAIRRNSK
KACDAIRKQWHIIVEGDDVTPPIKNFKDMRFPEPILKKLRAKGIVQPTPIQVQGLPVILS
GRDMIGIAFTGSGKTLVFVLPLIMVALQEEIMMPIAPGEGPFGLIICPSRELARQTYEVI
EEFIEPLRESGYPDLRPLLCIGGVDMKSQVDVVKRGVHIVVATPGRLKDLLAKKKMNLDN
CRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARNALVKPVIVN
VGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLVFCENKADVDDIHEYLLLKGV
EAVAVHGGKDQEEREYAIAAFKACKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYV
HRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEEIT
NASGVKGCAYCGGLGHRIRDCPKLDHQRSQQIANSRRDYFGSGGYRGEI

Transcript Sequence

Gene sequence data has not been registered.